Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900104.1_cds_XP_016450122.1_44604
CDS Infomation

[gene=LOC107774975] [db_xref=GeneID:107774975] [protein=girdin-like] [protein_id=XP_016450122.1] [location=join(126657..126692,126774..126855,126929..126975,127056..127145,127238..127291,128831..128908,129003..129071,129153..129308,129424..129550,131091..131131,131532..131621,131701..131805,134746..134922,135198..135307,135421..135496)] [gbkey=CDS]
Sequence

ATGGACTGTCGCCACGCCTCCCTTGGCCGTCGAACGTTGGAAGAAATTCGTCAAAAGAGA
GCAGCAGAGAGATTAAGCAAAACCTCTTCTGGACCCGATCTTACCAATATCCCTAATGAG
GTTGTGGGGATTAAAAGATCTGAGAGTGCAACTCGACTATCAGAGAATGATATGAGTGGT
TTAGTTTCTCAATTGAAACAAATTCAAAAAAATAATGCAGAACTGGATGAAGCAAATAGA
GCACTGGCCTTAAAGCTTCAGACAAAAGAAGCCGAGAACAACATGTTGCAAAAGCGTCTT
AATGATCTGGAGCAAAATACTGTACCTTCATTAAGAAAAGCACTCAAGGATGTTGCCATG
GAAAAGGATGCAGCAGTTGTTGCACGAGAGGATCTTTCAGCTCAGCTTCGTGCAATTAAG
AAACGTGTGAAGGAAGTAGAAGAAGAACAATATCGGGCTGAAGAGGATGCAGCATTGCTA
AGAGCAGAACTTAACTCATTACAGCAGCAAGCAATGTCCGGTCCTGTTAGTGGTGTAAAT
CCAATGAATTATCCGCCAGATCATATGCATGTTATGGAGAAGGAGCTAGCAAATCTAAAA
TCTCAATTAGAGCAAATGACCCTGTTGAGGCAACAAGAAAGACAGCAGTTAGTGGAGGAG
CAAGCGCGCATATCTACACTAACTTCTCAAAAGCAGGATTTGGAAGAGAAGCTTGCTGTT
ATGTCCAATAAGGTCTCAGATGAAGTCACCGGAAAGGCATCCCAGAAGACATTCTCGGGG
GAAGACAAGGGGAGGCTTGAAAAGCAATTACATGATATGGCTGTGGCCATTGAAAGATTG
GAAAGTAGCCGGCAGAAACTTCTAATGGAGATTGATTCACAATCCTCGGAGATAGAGAGG
CTATTTGAGGAAAATTATAATCTCTCGTCCGCTCATCAAGAAGCTCTAGGGGTGGCTGTG
CAGTGGGAGAATCAGGTCAAAGATTGTCTCAAGCAAAATGAGGAGCTTCGTGCCATATTA
GATAAGTTGAGGACAGACCAAGCTGCAATAGCAACTGCAAACAACCTAATCCAGCAAGGC
GTCTCAGGATCTATCAAAGGCAGCAAAAATGAAATTCAAGGCACACAATATGCTGAAATC
TTCTCCATCAAGAGTCAGCTAGCTAAAGAGCAGAGCAAAGCAGAAGCACTGTCTGCTGAA
ATCTTGCAGCTCAATGCACGGCTCCAGCAGGCCACGCAAGCATACAATAGTCTCACTCGC
ATCTATACACCTGTTCTAAGGAACATCGAGAACAGTCTCGTGACTTTGAAGCAAGATGGC
ACGGTTAGAGTCCAATGA

Peptide Sequence

PEP ID

XP_016450122.1
PEP Infomation

PREDICTED: girdin-like [Nicotiana tabacum]
Sequence

MDCRHASLGRRTLEEIRQKRAAERLSKTSSGPDLTNIPNEVVGIKRSESATRLSENDMSG
LVSQLKQIQKNNAELDEANRALALKLQTKEAENNMLQKRLNDLEQNTVPSLRKALKDVAM
EKDAAVVAREDLSAQLRAIKKRVKEVEEEQYRAEEDAALLRAELNSLQQQAMSGPVSGVN
PMNYPPDHMHVMEKELANLKSQLEQMTLLRQQERQQLVEEQARISTLTSQKQDLEEKLAV
MSNKVSDEVTGKASQKTFSGEDKGRLEKQLHDMAVAIERLESSRQKLLMEIDSQSSEIER
LFEENYNLSSAHQEALGVAVQWENQVKDCLKQNEELRAILDKLRTDQAAIATANNLIQQG
VSGSIKGSKNEIQGTQYAEIFSIKSQLAKEQSKAEALSAEILQLNARLQQATQAYNSLTR
IYTPVLRNIENSLVTLKQDGTVRVQ

Transcript Sequence

Gene sequence data has not been registered.